www.rockefeller.edu Center for Studies in Physics and Biology

Welcome to the Nucleosome Explorer website



Software for download (briefly described here): DNABEND (updated Oct. 2007) and DynaPro (July 2007).

GBrowse view of the S.cerevisiae nucleosome data (in the absence of other DNA-binding factors) is available here.

Supporting data (explained here); pre-computed nucleosome energies, probabilities and occupancies for the S.cerevisiae genome:

Locations of experimentally known S.cerevisiae nucleosomes (in the GBrowse GFF format, explained here):

DNA sequences for which in vitro nucleosome positions are known with high (1-2 bp) resolution:

Comments and Bug reports

  • For sending comments or reporting problems with the web server, please send email to Yupu Liang or Alexandre Morozov.
  • For sending comments or reporting problems with the algorithm, please send email to Alexandre Morozov.


  • All software used on this website is available to academic users free of charge.